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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912254.1_cds_XP_016462295.1_55536
CDS Infomation

[gene=LOC107785487] [db_xref=GeneID:107785487] [protein=probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial isoform X2] [protein_id=XP_016462295.1] [location=join(30203..30484,30927..30971,31823..31897,32288..32384,32710..32800,33160..33209,33949..34076,34196..34281,34909..34984,35112..35195,35322..35436,35661..35749,36047..36193)] [gbkey=CDS]
Sequence

ATGGCGTCTTTATTACCAAGCTTGTCATCCCCAATTTCCCGTCTAAGCTTACTACTATAT
CGACCCTCACTTCAGCTTACAATCAAAGCTACAAATAAATTACAATTTCGCAACAAATCA
GTAAAAAAAACCCAGTTGTTCAAATTTTTTCCAGCTCATTGTTTTTCTAATTCAGCTTCT
AATTTACAAATGGTTCAAACCCAGAAACAAAGAATGGGAGAAAATGAGAATTTAGTTGTT
TTGGGTATTGAAACTAGCTGTGATGATACTGCTGCCGCTGTGGTAAATAGCAATGGTGAA
ATTCTCAGCCAAGTTATCTCTTCTCAGGCAGAACTACTTGCTCGATATGGAGGAGTTGCT
CCTAAGATGGCAGAGGAAGCACATGCACTGGTGATTGATCAGGTGGTACAAGAAGCGCTA
GATAAAGCTAATCTGACTGAAAAGGATCTAACTGCAGTTGCTGTCACCATTGGTCCTGGT
TTAAGCCTTTGTCTGCGGGTTGGTGTGCAGAAAGCAAGAAAAGTTGCTGGTTCTCATAAT
TTACCTCTTGTCGGTGTCCATCACATGGAAGCTCATACTCTGGTTGCCAGGCTAGTGGAA
AGAGAGTTGCAGTTTCCTTTCATGGCCCTACTTGTCTCAGTTGATGATGCAATTGGCGAG
GCATATGACAAAACAGCAAAATGGCTTGGTCTTGATTTGAGGAGGAGTGGGGGCCCCGCT
GTGGAGGAGCTAGCTCGAGAAGGAGATGCCAAATCTGTCAAATTTAAAGTCCCTATGAAA
CAACACAAGGATTGCAACTTCTCATATGCTGGTCTGAAGACGCAAGTGAGGTTGGCAATT
GAAGCAAAAAGAATCAATGCTGAAATCTCTCTTGCTTCAGCTTCCGATGAAGAAAGGCAG
GCTCGGGCAGATATTGCTGCCTCCTTCCAGCGAGTTGCAGTATTACATTTGGAGGAAAAG
TGTGAACGGGCAATTGAGTGGGCTTTGAACATTGAGCCTTCAATAAATCATTTGGTAGTG
TCTGGAGGTGTTGCTTCTAATAAATATGTCAGATCTCGGCTTGATGAGGTTGTGAAGAGG
AAAGGCCTGAAACTTGTATGCCCCCCTCCAAGCCTTTGTACTGATAATGGTGTAATGATT
GCTTGGACTGGCATTGAACATTTCCGTCTTGGCAGATTTGATCCTCCACCTCCTGCAAAC
GAACCAGAAGATGTCGTGCTTGATTTGCGCCCAAGGTGGCCGCTTGGCGAGGAGTATGCT
GAAGGAAAAAGTGAAGCTCGCTCAATGAGAACAGCACGGATTCATCCATCACTTACCTCT
CTCATTAAGGCTTCTGTTAAGCAAGAGTCACAATCTGCAATTTAA

Peptide Sequence

PEP ID

XP_016462295.1
PEP Infomation

PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial isoform X2 [Nicotiana tabacum]
Sequence

MASLLPSLSSPISRLSLLLYRPSLQLTIKATNKLQFRNKSVKKTQLFKFFPAHCFSNSAS
NLQMVQTQKQRMGENENLVVLGIETSCDDTAAAVVNSNGEILSQVISSQAELLARYGGVA
PKMAEEAHALVIDQVVQEALDKANLTEKDLTAVAVTIGPGLSLCLRVGVQKARKVAGSHN
LPLVGVHHMEAHTLVARLVERELQFPFMALLVSVDDAIGEAYDKTAKWLGLDLRRSGGPA
VEELAREGDAKSVKFKVPMKQHKDCNFSYAGLKTQVRLAIEAKRINAEISLASASDEERQ
ARADIAASFQRVAVLHLEEKCERAIEWALNIEPSINHLVVSGGVASNKYVRSRLDEVVKR
KGLKLVCPPPSLCTDNGVMIAWTGIEHFRLGRFDPPPPANEPEDVVLDLRPRWPLGEEYA
EGKSEARSMRTARIHPSLTSLIKASVKQESQSAI

Transcript Sequence

Gene sequence data has not been registered.